Back to Guides
Venafi SeriesEnterprise PKI

Agent vs Agentless Certificate Management

The architectural decision that shapes your entire CLM deployment

12 min readJanuary 2026
Agent vs Agentless Certificate Management Architecture
Agentless
  • • No software to install
  • • Connect via SSH/API
  • • Faster initial setup
Agent
  • • Software on each server
  • • Deep local visibility
  • • Real-time monitoring

The Core Question

When deploying certificate lifecycle management (CLM), you'll face a fundamental architectural choice: agent-based or agentless management.

This decision affects:

Discovery
How certs are found
Provisioning
How certs are installed
Validation
How certs are verified
Operations
Ongoing overhead

The Short Answer

You Likely Need...If You Have...
AgentlessStandardized environments, similar configs, limited server access
AgentDiverse environments, varying configs, need deep inspection
Both (Hybrid)Large enterprises — most common approach

Agentless Architecture

How It Works

CLM Platform
├── [SSH] ──────► Linux Servers
├── [WinRM] ────► Windows Servers
├── [REST API] ─► F5, Citrix, AWS
└── [HTTPS] ────► Cloud Services

Connection Methods:

SSH (Linux/Unix)WinRM/PowerShell (Windows)Vendor APIs (F5, Citrix)HTTPS/REST

Agentless Capabilities

CapabilitySupport
Network discovery✅ Full
Certificate deployment✅ Full
Key generation (remote)⚠️ Requires crypto utilities
Local store access❌ Limited
Certificate validation✅ Network-level
Continuous monitoring⚠️ Scheduled scans

Best For

  • Load balancers (F5, Citrix, HAProxy)
  • Web servers with standard configs
  • Cloud instances with API access
  • Network devices
  • Standardized server fleets

Limitations

  • Can't see local stores (CAPI, JKS)
  • Can't discover certs not on network
  • Requires credential management
  • Firewall rules for every connection

Agent-Based Architecture

How It Works

CLM Platform
├── Agent ─► Local Stores (CAPI, JKS, PEM)
├── Agent ─► Applications (Tomcat, IIS, nginx)
└── Agent ─► File System (certs anywhere)

Agents run as a service on target servers, accessing local certificate stores directly, monitoring for changes in real-time, and executing provisioning locally.

Agent Capabilities

CapabilitySupport
Network discovery✅ Full
Local store discovery✅ Full (CAPI, JKS, PKCS#12, PEM)
Certificate deployment✅ Full
Key generation (local)✅ On-device
Certificate validation✅ Deep validation
Continuous monitoring✅ Real-time
Application restart✅ After provisioning

Best For

  • Windows servers with CAPI stores
  • Java applications with keystores
  • Servers behind firewalls
  • Heterogeneous environments
  • Apps requiring post-deploy actions

Limitations

  • Agent deployment on every server
  • Agent updates and maintenance
  • Server resources consumed
  • Security review for permissions

Feature Comparison

FeatureAgentlessAgent-Based
Initial Setup
Deployment effortLowerHigher
Time to first discoveryHoursDays-weeks
Discovery
Network certificates✅ Full✅ Full
Local stores (CAPI)❌ No✅ Yes
Java KeyStores❌ No✅ Yes
Real-time detection⚠️ Scheduled✅ Continuous
Provisioning
Key generation locationRemote (CLM server)Local (target server)
Application restart⚠️ Via scripts✅ Native integration
Operations
Credential managementRequired for each deviceAgent trust only
ScalabilityLimited by CLM serverDistributed across agents

The Hybrid Reality

Most enterprises use both. Real environments have diverse infrastructure that benefits from different approaches:

CLM Platform
Agentless
F5, CDN
Network Devices
Agent
Windows/Linux
Java Apps
Agentless
AWS/Azure
Kubernetes

Decision by Environment

EnvironmentRecommendedWhy
F5 BIG-IPAgentlessExcellent API support
Windows Server IISAgentCAPI store access
Java TomcatAgentKeyStore access
AWS EC2AgentlessAPI + ephemeral instances
KubernetesAgentlesscert-manager integration
Network devicesAgentlessSSH/API only option
Legacy UnixAgentNo standard API

Security Considerations

Agentless Security

Credentials stored centrally

→ Use privileged access management (PAM)

Wide network access required

→ Segment CLM network, limit scope

SSH/WinRM exposure

→ Harden protocols, rotate keys

Agent Security

Agent runs with privileges

→ Least-privilege principle, audit

Agent binary integrity

→ Code signing, hash verification

Agent communication

→ Mutual TLS, certificate pinning

Key Security Questions

  1. What credentials does agentless require? How are they protected?
  2. What privileges does the agent need? Can we limit them?
  3. How is agent-to-server communication secured?
  4. What's the blast radius if either is compromised?

Operational Considerations

Agentless Operations

Daily:

  • • Monitor scheduled scans
  • • Review credential health
  • • Check for failed connections

Weekly:

  • • Rotate service account credentials
  • • Review firewall rules

Agent Operations

Daily:

  • • Monitor agent heartbeats
  • • Review agent logs
  • • Check agent versions

Weekly:

  • • Plan agent updates
  • • Review resource usage

Which Has More Overhead?

  • Initial: Agent has higher upfront effort
  • Ongoing: Roughly equivalent, different focus
  • Scale: Agent distributes load better
  • Troubleshooting: Agent provides more local visibility

Making the Decision

Choose Agentless If...

  • Standardized infrastructure
  • Similar server configurations
  • Managing load balancers/network devices
  • Want fastest time to value
  • Can't install software on production
  • Managing cloud-native workloads

Choose Agent If...

  • Diverse, heterogeneous environments
  • Need to discover local stores
  • Servers behind firewalls
  • Need real-time change detection
  • Apps require post-deploy actions
  • Managing Java apps with keystores

Choose Hybrid (Most Common) If...

  • You have a mix of the above
  • Different teams manage different infrastructure
  • Migrating from manual processes
  • Need complete certificate visibility

Implementation Tips

Starting with Agentless

  1. Begin with load balancers - Best API support, highest value
  2. Standardize credentials - Service accounts with limited scope
  3. Map firewall requirements - Document before deploying
  4. Start with discovery only - Prove visibility before provisioning
  5. Expand gradually - Add device types one at a time

Starting with Agents

  1. Pilot with non-production - Test agent behavior first
  2. Define agent policies - What can the agent do?
  3. Plan deployment method - SCCM, Ansible, manual?
  4. Monitor agent health - Dashboards from day one
  5. Document rollback - How to remove if needed

Common Mistakes

MistakeConsequencePrevention
Deploying agents everywhereOperational overhead explosionStart targeted, expand based on need
Agentless with weak credentialsSecurity riskPAM integration, rotation
No hybrid strategyCoverage gapsPlan for both from start
Ignoring firewall requirementsFailed deploymentsNetwork team involvement early

Frequently Asked Questions

Can I start with one approach and switch later?

Yes, and this is common. Many organizations start agentless for quick wins, then add agents for environments needing deeper inspection. The approaches complement each other.

Which approach is more secure?

Neither is inherently more secure — they have different risk profiles. Agentless centralizes credential risk; agent-based distributes it. Both require careful implementation and monitoring.

Do I need agents for cloud environments?

Usually not. Cloud providers offer APIs for certificate management, and ephemeral instances make agent deployment impractical. Agentless via cloud APIs is typically the right choice.

How do agents handle server reboots?

Agents are typically installed as system services that start automatically on boot. They reconnect to the central platform and resume normal operations. Configuration is usually persisted locally.

Learn More

FixMyCert Venafi Series:

Related FixMyCert Content:

Related Resources